Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015841996.1_cds_XP_016508213.1_21259
CDS Infomation

[gene=LOC107825813] [db_xref=GeneID:107825813] [protein=proline--tRNA ligase, cytoplasmic-like] [protein_id=XP_016508213.1] [location=join(15361..15382,15470..15597,16409..16501,16591..16707,17304..17491,17670..17736,19797..19919,20043..20195,20296..20580,20748..20966,21720..21813,22376..22440)] [gbkey=CDS]
Sequence

ATGGCCAGTAAAGATTCAAATAAAGGAAAAAAGAAAGAAGTCAAGAAAGAGACAGGTCTT
GGTCAGGGAAAAAAGAAAGAAGTTAAGAAAGAGACAGGTCTTGGTCTCTCTTACAAAAAG
GATGAAAATTTTGGAGAGTGGTATTCTGAGGTTGTCGTTAGTGGTGAAATGATCGAGTAC
TACGACATATCTGGCTGTTATATTCTACGGCCATGGGCAATGTCTATCTGGGAGATATTG
CAGGCGTTTTTTGATGCTGAAATTAAGAAAATGAAGATACAGAACTCTTACTTTCCTCTG
TTTGTGTCCCCTGGTGTTCTACAAAAGGAAAAGGACCACATAGAGGGATTTGCTCCTGAG
GTTGCTTGGGTTACGAAATCTGGTGAATCTGATTTGGAAGTACCCATTGCAATTCGACCA
ACTAGTGAAACAGTGATGTATCCATACTTCTCTAAGTGGATAAGGGGACATCGTGACTTG
CCCTTGAGACTCAACCAGTGGTGCAATGTTGTACGATGGGAGTTTAGCAACCCTACCCCC
TTCATCAGGAGTCGTGAGTTTCTCTGGCAAGAAGGACACACTGCTTTTGCAACAAAGGAG
GAAGCAGATACAGAGGTTCTTGATATCTTGGAATTGTATAGACGTATATATGAAGAATTT
TTAGCCGTTCCAGTCAGTAAGGGAAAGAAAAGTGAGCTTGAGAAGTTTGCCGGTGGACTC
TACACGACTACAGTTGAGGCTTTTATCCCTAATACTGGCCGTGGTATCCAAGGTGCAACT
TCACACTGTTTAGGCCAGAATTTTGCAAAAATGTTTGAGATAAATTTTGAAAATGAGAAG
GGAGAGAAGGCTATGGTCTGGCAGAACTCATGGGCCTATACTACTAGAACAATCGGTGTT
ATGATCATGGTTCATGGGGATGACAAAGGCCTGGTCTTACCTCCTAAAGTAGCATCAACT
CAAGTAATTGTTATTCCTGTGCCATACAAGGATGCAAATACTCAAGGGATCTTTGATGCC
TGTGCTGCTACCGTTGAGAAGTTGAATGAATCAGGTATTCGTGCTGAGGCAGACTTCAGA
GATAACTATTCACCTGGCTGGAAATATTCTCATTGGGAAATGAAGGGGGTTCCTCTTAGG
ATTGAAATAGGACCAAAAGACCTTGCAAATAACCAGGTACGAGCTGTTCGACGTGACAAC
GGAGCCAAAACAGATATTCCCATGGATAATCTTGTCGAACAACTAAAAGATCTGCTCGCC
ACTATCCAACAAAATCTATTTGATGTTGCGAAACAAAAGAGAGATGCCTGCGTTCAGATT
GTAAGAACTTGGGATGAATTTACGGTAGCACTGGGCCAAAAGAAATTGGTCTTGGCTCCT
TGGTGTGATGAGGAGGATGTCGAGAAAGATGTCAAGGCACGCACTAAAGGGGAGATGGGT
GCAGCAAAGACTCTTTGCTCTCCATTTGACCAGCCTGAGCTGCCTGAAGGTACATTGTGC
TTCGCATCAGGTAAACCTGCTAAGAAGTGGACATACTGGGGCCGCAGCTATTGA

Peptide Sequence

PEP ID

XP_016508213.1
PEP Infomation

PREDICTED: proline--tRNA ligase, cytoplasmic-like [Nicotiana tabacum]
Sequence

MASKDSNKGKKKEVKKETGLGQGKKKEVKKETGLGLSYKKDENFGEWYSEVVVSGEMIEY
YDISGCYILRPWAMSIWEILQAFFDAEIKKMKIQNSYFPLFVSPGVLQKEKDHIEGFAPE
VAWVTKSGESDLEVPIAIRPTSETVMYPYFSKWIRGHRDLPLRLNQWCNVVRWEFSNPTP
FIRSREFLWQEGHTAFATKEEADTEVLDILELYRRIYEEFLAVPVSKGKKSELEKFAGGL
YTTTVEAFIPNTGRGIQGATSHCLGQNFAKMFEINFENEKGEKAMVWQNSWAYTTRTIGV
MIMVHGDDKGLVLPPKVASTQVIVIPVPYKDANTQGIFDACAATVEKLNESGIRAEADFR
DNYSPGWKYSHWEMKGVPLRIEIGPKDLANNQVRAVRRDNGAKTDIPMDNLVEQLKDLLA
TIQQNLFDVAKQKRDACVQIVRTWDEFTVALGQKKLVLAPWCDEEDVEKDVKARTKGEMG
AAKTLCSPFDQPELPEGTLCFASGKPAKKWTYWGRSY

Transcript Sequence

Gene sequence data has not been registered.